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Date: 2025-01-04 04:25:09
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The same problem happened to me. It is due to incompatibility of python packages. missingpy is incompatible with the last version of python package.

Precisely the private function _check_weights does not exist anymore in neighbors._base.py in the last version of scikit-learn.

Furthemore, if you have a virtual environment, open the directory ".venv/lib/python3.13/site-packages/missingpy/knnimpute.py", you can see that _check_weights is imported from sklearn.neighbors.base and not from sklearn.neighbors._base.

This means that missingpy is not maintain anymore.

If you want to use it, you need to uninstall the newest version of scikit-learn :

And install one of the latest version of scilit-learn which is compatible with missingpy. For example you can install a version <= 1.1. For example :

pip install scikit-learn==1.1

Finally use the following commands.

import sklearn.neighbors._base sys.modules['sklearn.neighbors.base'] = sklearn.neighbors._base
from missingpy import MissForest

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Posted by: JUNIOR JUMBONG