You can try as per below-
#full dump backup except files table
mysqldump -R -A --ignore-table=mh_website_db.files > full_backup.sql
#data only from files table based on condition like only last 1 day entries as you should have all data before this via previous day job.
mysqldump -t mh_website_db files -w"timestamp > subdate(curdate(), interval 1 day)" > files_difference.sql
note: you can also use "--insert-ignore" parameter with dump command, if this table has primary key/unique key to avoid duplicate issue.
#First import full dump except files table
mysql < full_backup.sql
#then import new entries from files table.
mysql < files_difference.sql
If you need something else then please elaborate it.