I have the same issue, I think it is actually something caused by NativeWind. I found a GitHub issue related to this.

I assume that NativeWind uses "shadow*" style props internally for the version(s) we are on. I would expect this issue to be resolved in later versions of NativeWind.

If you want to suppress these warnings, the GitHub issue mentions this solution:

const originalConsoleWarn = console.warn;

console.warn = (...args) => {
  // https://github.com/react-navigation/react-navigation/issues/11730
  if (
    args[0] === '"shadow*" style props are deprecated. Use "boxShadow".' &&
    new Error().stack?.includes("useNavigationBuilder")
  ) {
    return;
  }

  originalConsoleWarn(...args);
};